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Source code for nengo_spa.networks.identity_ensemble_array

import warnings

import nengo
import numpy as np
from nengo.exceptions import ValidationError
from import with_self

from nengo_spa.typechecks import is_iterable

[docs]class IdentityEnsembleArray(nengo.Network): """An ensemble array optimized for representing the identity circular convolution vector besides random unit vectors. The ensemble array will use ensembles with *subdimensions* dimensions, except for the first *subdimensions* dimensions. These will be split into a one-dimensional ensemble for the first dimension and a *subdimensions-1* dimensional ensemble. Parameters ---------- neurons_per_dimension : int Neurons per dimension. dimensions : int Total number of dimensions. Must be a multiple of *subdimensions*. subdimensions : int Maximum number of dimensions per ensemble. **kwargs : dict Keyword arguments to pass through to the `nengo.Network` constructor. Attributes ---------- input : nengo.Node Input node. output : nengo.Node Output node. """ def __init__(self, neurons_per_dimension, dimensions, subdimensions, **kwargs): super(IdentityEnsembleArray, self).__init__(**kwargs) self.neurons_per_dimension = neurons_per_dimension self.dimensions = dimensions self.subdimensions = subdimensions self.neuron_input = None self.neuron_output = None cos_sim_dist = nengo.dists.CosineSimilarity(dimensions + 2) with self: self.input = nengo.Node(size_in=dimensions) self.output = nengo.Node(size_in=dimensions) self.first = nengo.Ensemble(neurons_per_dimension, 1) nengo.Connection(self.input[0], self.first, synapse=None) nengo.Connection(self.first, self.output[0], synapse=None) if subdimensions > 1: self.second = nengo.Ensemble( neurons_per_dimension * (subdimensions - 1), subdimensions - 1, eval_points=cos_sim_dist, intercepts=cos_sim_dist, ) nengo.Connection(self.input[1:subdimensions], self.second, synapse=None) nengo.Connection( self.second, self.output[1:subdimensions], synapse=None ) if dimensions > subdimensions: self.remainder = nengo.networks.EnsembleArray( neurons_per_dimension * subdimensions, dimensions // subdimensions - 1, subdimensions, eval_points=cos_sim_dist, intercepts=cos_sim_dist, ) nengo.Connection( self.input[subdimensions:], self.remainder.input, synapse=None ) nengo.Connection( self.remainder.output, self.output[subdimensions:], synapse=None )
[docs] @with_self def add_neuron_input(self): """Adds a node providing input to the neurons of all ensembles. This node will be accessible through the *neuron_input* attribute. Returns ------- nengo.Node The added node. """ if self.neuron_input is not None: warnings.warn("neuron_input already exists. Returning.") return self.neuron_input if any(isinstance(e.neuron_type, nengo.Direct) for e in self.all_ensembles): raise ValidationError( "Ensembles use Direct neuron type. " "Cannot give neuron input to Direct neurons.", attr="all_ensembles[i].neuron_type", obj=self, ) self.neuron_input = nengo.Node( size_in=self.neurons_per_dimension * self.dimensions, label="neuron_input" ) i = 0 for ens in self.all_ensembles: nengo.Connection( self.neuron_input[i : (i + ens.n_neurons)], ens.neurons, synapse=None ) i += ens.n_neurons return self.neuron_input
[docs] @with_self def add_neuron_output(self): """Adds a node providing neuron (non-decoded) output of all ensembles. This node will be accessible through the *neuron_output* attribute. Returns ------- nengo.Node The added node. """ if self.neuron_output is not None: warnings.warn("neuron_output already exists. Returning.") return self.neuron_output if any(isinstance(e.neuron_type, nengo.Direct) for e in self.all_ensembles): raise ValidationError( "Ensembles use Direct neuron type. " "Cannot get neuron output from Direct neurons.", attr="all_ensembles[i].neuron_type", obj=self, ) self.neuron_output = nengo.Node( size_in=self.neurons_per_dimension * self.dimensions, label="neuron_output" ) i = 0 for ens in self.all_ensembles: nengo.Connection( ens.neurons, self.neuron_output[i : (i + ens.n_neurons)], synapse=None ) i += ens.n_neurons return self.neuron_output
[docs] @with_self def add_output(self, name, function, synapse=None, **conn_kwargs): """Adds a new decoded output. This will add the attribute named *name* to the object. Parameters ---------- name : str Name of output. Must be a valid Python attribute name. function : func Function to decode. synapse : float or nengo.Lowpass Synapse to apply to the decoded connection to the returned output node. conn_kwargs : dict Additional keywword arguments to apply to the decoded connection. Returns ------- nengo.Node Node providing the decoded output. """ if is_iterable(function): function = list(function) if len(function) != 3 and len(function) != self.remainder.n_ensembles + 2: raise ValidationError( "Must provide one function per ensemble or one function " "each for the first ensemble, the second ensembles, and " "all remaining ensembles." ) first_fn = function[0] second_fn = function[1] remainder_fn = function[2:] else: first_fn = second_fn = remainder_fn = function first_size = np.asarray(first_fn(np.zeros(self.first.dimensions))).size second_size = np.asarray(second_fn(np.zeros(self.second.dimensions))).size remainder_start = first_size + second_size remainder_fn_out = self.remainder.add_output(name, remainder_fn) remainder_size = remainder_fn_out.size_out output = nengo.Node( size_in=first_size + second_size + remainder_size, label=name ) setattr(self, name, output) nengo.Connection( self.first, output[:first_size], function=first_fn, synapse=synapse, **conn_kwargs ) nengo.Connection( self.second, output[first_size:remainder_start], function=second_fn, synapse=synapse, **conn_kwargs ) nengo.Connection( remainder_fn_out, output[remainder_start:], synapse=synapse, **conn_kwargs ) return output